You should have 40 chips if you completed every stage. There are exactly the number of chips needed in game for all 9 capsules. If you don't know you can see completion status on the main screen below the boss name when highlighting over a level.
I did complete every stage 100 percent, and I had the acheivement called data hoarder. I redid the game and made it to sigma stage 1 and finally got hadoken by dying a lot and making it their without taking any damage, without the 40 chips by the way. But now I'm stuck when the capsule shows up and can't get the hadoken.